estimates cross-product of each SNP with one trait

Source: R/flashfm.R

estimates cross-product of each SNP with one trait

Sxy.hat(beta1, Mx, N, Vx, muY)

Arguments

beta1

vector of effect estimates from single SNP models
Mx

vector of mean genotype counts; 2*raf
N

sample size
Vx

vector of genotype count variances
muY

trait variance

Value

vector of cross-products between SNPs and trait