Plot a matrix of probabilities, where rows are kappa values and columns are SNPs (MPP matrix) or models (PP matrix)

Plot a matrix of probabilities, where rows are kappa values and columns are SNPs (MPP matrix) or models (PP matrix)

PP.plot.fn(pp, pthr)

Arguments

pp	Matrix of probabilities: rows are kappa values; columns are SNPs (MPP matrix) or models (PP matrix)
pthr	Threshold for keeping probabilities from SNPs/models that are greater than pthr for at least one kappa value

Value

Matrix of probabilites that are plotted (only SNPs/models with MPP/PP > pthr at some kappa value are retained)